Basic Information
Locus ID:
TC10G1190
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Translocase of chloroplast 90
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 32002110 | 32006756 | + | TC10G1190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.23 | 95,738.43 Da | 44.12 | 89.21 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04548 | AIG1 family | 185 | 339 | 2.5E-26 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 532 | 796 | 4.0E-113 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 179 | 313 | 3.28E-20 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 153 | 401 | 9.8E-55 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 74 | 795 | 2.7E-209 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 182 | 413 | 30.008383 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 505 | 527 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 61 | - | - |
| Coils | Coil | Coil | 496 | 516 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20300.1 | Avirulence induced gene (AIG1) family protein. | 0 |
| RefSeq | XP_034699909.1 | translocase of chloroplast 90, chloroplastic [Vitis riparia] | 0 |
| Q6S5G3 | Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B6Z0T5 | AIG1-type G domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_007208 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology