Basic Information
Locus ID:
TC10G1112
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 30109409 | 30110506 | + | TC10G1112 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 40,299.02 Da | 34.22 | 78.91 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02879 | GH18_plant_chitinase_class_V | 32 | 364 | 1.14323E-145 | - |
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 38 | 358 | 5.9E-80 | IPR001223 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 266 | 329 | 1.31E-7 | IPR029070 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 35 | 360 | 5.48E-72 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 50 | 360 | 7.5E-107 | - |
| Gene3D | G3DSA:3.10.50.10 | - | 265 | 329 | 7.5E-107 | IPR029070 |
| SMART | SM00636 | 2g34 | 34 | 358 | 5.4E-98 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 34 | 366 | 70.061417 | IPR001223 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_021276210.1 | chitotriosidase-1-like [Herrania umbratica] | 0 |
| O81862 | Class V chitinase OS=Arabidopsis thaliana OX=3702 GN=ChiC PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0ZNV3 | chitotriosidase-1-like OS=Herrania umbratica OX=108875 GN=LOC110410693 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology