Basic Information
Locus ID:
TC10G0938
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 25697546 | 25701596 | + | TC10G0938 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.77 | 70,180.38 Da | 34.80 | 95.40 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 299 | 565 | 1.1E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 9.7E-12 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 119 | 179 | 8.6E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 193 | 6.8E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 279 | 568 | 9.44E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 375 | 586 | 1.2E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 210 | 3.3E-51 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 268 | 374 | 2.9E-36 | - |
| SMART | SM00220 | serkin_6 | 298 | 567 | 1.0E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 298 | 568 | 35.4813 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 120 | 142 | 7.457832 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 417 | 429 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 304 | 326 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 166 | 179 | 4.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 121 | 134 | 4.2E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010687665.2 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1Q3C3Z2 | Pkinase domain-containing protein/LRRNT_2 domain-containing protein/LRR_8 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_18476 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology