Basic Information
Locus ID:
TC10G0417
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
protein binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 11401238 | 11419026 | + | TC10G0417 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.14 | 42,296.46 Da | 48.80 | 77.20 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 46 | 257 | 6.02E-24 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 44 | 268 | 1.9E-14 | IPR027267 |
| Coils | Coil | Coil | 243 | 263 | - | - |
| Coils | Coil | Coil | 148 | 168 | - | - |
| Coils | Coil | Coil | 185 | 212 | - | - |
| Coils | Coil | Coil | 219 | 239 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_010690773.1 | SH3 domain-containing protein 2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9W2Y4 | SH3 domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_04G084500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology