Basic Information
Locus ID:
TC10G0196
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Receptor-like cytosolic serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 5354430 | 5356577 | + | TC10G0196 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.01 | 58,536.41 Da | 43.23 | 92.97 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 264 | 473 | 1.6E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 240 | 505 | 4.72E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 236 | 334 | 3.3E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 335 | 523 | 1.4E-49 | - |
| SMART | SM00220 | serkin_6 | 261 | 505 | 2.3E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 261 | 510 | 33.304665 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 372 | 384 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 209 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16750.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_034680447.1 | probable serine/threonine-protein kinase PBL7 [Vitis riparia] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A5B7B7J0 | Putative serine/threonine-protein kinase CDL1-like isoform X1 OS=Davidia involucrata OX=16924 GN=Din_034391 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg28913, jg846 |
| Apiaceae | Apium graveolens | 1 | Ag9G00835 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-5154 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-10971 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-9315 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000009l.1208 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00005547 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-24118, nbisL1-mrna-24119 |
| Salicaceae | Populus euphratica | 2 | populus_peu08649, populus_peu36701 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132599368 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107012481 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_7940 |
| Tamaricaceae | Tamarix chinensis | 1 | TC10G0196 |