Basic Information
Locus ID:
TC09G2413
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Serine threonine-protein kinase-like protein CCR4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 89122825 | 89125173 | - | TC09G2413 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 85,220.85 Da | 45.76 | 84.36 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 481 | 762 | 2.41241E-90 | - |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 232 | 258 | 5.0E-5 | - |
| Pfam | PF00069 | Protein kinase domain | 476 | 757 | 2.8E-47 | IPR000719 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 126 | 299 | 5.67E-13 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 452 | 760 | 2.29E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 563 | 767 | 2.5E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 440 | 562 | 2.1E-31 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 158 | 321 | 9.3E-17 | IPR009091 |
| SMART | SM00220 | serkin_6 | 475 | 732 | 2.0E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 475 | 765 | 38.562511 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 481 | 503 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 609 | 621 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 407 | 442 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 424 | 442 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_004250410.1 | serine/threonine-protein kinase-like protein CCR4 [Solanum lycopersicum] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3Q7ITE3 | Protein kinase domain-containing protein OS=Solanum lycopersicum OX=4081 GN=101250181 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology