Basic Information
Locus ID:
TC09G2245
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 83221070 | 83223234 | + | TC09G2245 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.44 | 50,219.40 Da | 49.08 | 78.39 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 153 | 423 | 7.55832E-95 | - |
| Pfam | PF00069 | Protein kinase domain | 152 | 421 | 2.9E-50 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 130 | 427 | 1.35E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 111 | 224 | 7.7E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 225 | 441 | 4.4E-58 | - |
| SMART | SM00220 | serkin_6 | 147 | 425 | 3.1E-42 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 147 | 425 | 38.845192 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 153 | 179 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 270 | 282 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 100 | 125 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00330.1 | calmodulin-binding receptor-like cytoplasmic kinase 2. high overall homology to CRCK1 | 0 |
| RefSeq | XP_024044239.1 | calmodulin-binding receptor-like cytoplasmic kinase 2 [Citrus clementina] | 0 |
| Q8VZJ9 | Calmodulin-binding receptor-like cytoplasmic kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRCK2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A067HE95 | Protein kinase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g013401mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology