Basic Information
Locus ID:
TC09G2145
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
zinc finger CCCH domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 80308294 | 80308818 | - | TC09G2145 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.80 | 19,481.78 Da | 38.49 | 52.40 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF90229 | CCCH zinc finger | 132 | 155 | 3.79E-6 | IPR036855 |
| Gene3D | G3DSA:3.30.1370.210 | - | 26 | 158 | 1.1E-5 | - |
| SMART | SM00356 | c3hfinal6 | 131 | 156 | 0.0036 | IPR000571 |
| SMART | SM00356 | c3hfinal6 | 27 | 50 | 0.053 | IPR000571 |
| ProSiteProfiles | PS50103 | Zinc finger C3H1-type profile. | 130 | 157 | 11.901249 | IPR000571 |
| ProSiteProfiles | PS50103 | Zinc finger C3H1-type profile. | 30 | 51 | 11.009285 | IPR000571 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 104 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021731198.1 | zinc finger CCCH domain-containing protein 48-like [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803MB75 | Zinc finger CCCH domain-containing protein 48-like OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology