Basic Information
Locus ID:
TC09G1987
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
receptor-like serine threonine-protein kinase At5g57670
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 73884053 | 73887709 | - | TC09G1987 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 84,130.33 Da | 48.86 | 89.69 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 422 | 689 | 1.42671E-86 | - |
| CDD | cd00293 | USP_Like | 15 | 149 | 1.36287E-6 | - |
| Pfam | PF00069 | Protein kinase domain | 418 | 628 | 1.6E-43 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 14 | 152 | 1.0E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 397 | 687 | 3.69E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 381 | 489 | 6.1E-30 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 13 | 151 | 2.1E-6 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 491 | 699 | 2.5E-57 | - |
| SMART | SM00220 | serkin_6 | 416 | 676 | 1.4E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 416 | 694 | 36.371742 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 537 | 549 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 422 | 444 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77280.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_040997295.1 | probable receptor-like serine/threonine-protein kinase At5g57670 isoform X2 [Juglans microcarpa x Juglans regia] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J5BTN5 | Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_002808 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology