Basic Information
Locus ID:
TC09G1930
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 71352703 | 71354811 | - | TC09G1930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 78,116.21 Da | 44.58 | 84.57 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 383 | 648 | 1.23122E-97 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 28 | 267 | 6.20311E-69 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 30 | 267 | 1.1E-51 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 377 | 585 | 5.5E-43 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 29 | 268 | 1.59E-49 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 358 | 648 | 5.93E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 351 | 455 | 2.0E-28 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 24 | 275 | 2.0E-56 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 456 | 655 | 4.1E-60 | - |
| SMART | SM00220 | serkin_6 | 377 | 641 | 1.8E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 377 | 657 | 36.018391 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 502 | 514 | - | IPR008271 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 151 | 157 | - | IPR019825 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 383 | 405 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_023882237.1 | L-type lectin-domain containing receptor kinase S.6 [Quercus suber] | 0 |
| Q9FHX3 | L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3702 GN=LECRKS6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7N2KUC4 | Protein kinase domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology