Basic Information
Locus ID:
TC09G1529
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Short Name:
CPK30
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 51633111 | 51637280 | + | TC09G1529 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.51 | 62,607.08 Da | 39.79 | 86.67 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 66 | 324 | 2.77942E-138 | - |
| CDD | cd00051 | EFh | 444 | 506 | 9.57344E-19 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 68 | 325 | 3.7E-75 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 443 | 506 | 6.6E-13 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 373 | 432 | 1.2E-9 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 64 | 332 | 2.83E-87 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 354 | 532 | 1.01E-43 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 153 | 333 | 3.0E-61 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 334 | 509 | 6.1E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 68 | 152 | 1.8E-27 | - |
| SMART | SM00054 | efh_1 | 372 | 400 | 0.0017 | IPR002048 |
| SMART | SM00220 | serkin_6 | 67 | 325 | 3.0E-98 | IPR000719 |
| SMART | SM00054 | efh_1 | 408 | 436 | 0.0051 | IPR002048 |
| SMART | SM00054 | efh_1 | 444 | 472 | 4.2E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 480 | 508 | 3.6E-6 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 368 | 403 | 13.620752 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 440 | 475 | 14.290241 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 404 | 439 | 10.552258 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 67 | 325 | 48.314972 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 476 | 511 | 13.704439 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 417 | 429 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 453 | 465 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 73 | 96 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 187 | 199 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 489 | 501 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 46 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_012080192.1 | calcium-dependent protein kinase 10 [Jatropha curcas] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B7AT43 | Putative calcium-dependent protein kinase 10-like OS=Davidia involucrata OX=16924 GN=Din_029200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology