Basic Information
Locus ID:
TC09G0946
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Short Name:
AFC2
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 27351897 | 27355575 | + | TC09G0946 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 50,734.40 Da | 44.05 | 79.34 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14134 | PKc_CLK | 93 | 433 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 106 | 433 | 3.8E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 93 | 436 | 3.5E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 82 | 184 | 4.9E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 185 | 440 | 8.8E-71 | - |
| SMART | SM00220 | serkin_6 | 106 | 433 | 4.2E-75 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 106 | 433 | 38.081955 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 227 | 239 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24740.1 | FUS3-complementing gene 2. a LAMMER-type protein kinase that co-precipitates with serine/arginine-rich (SR) proteins in vitro, interaction modulated by phosphorylation of the proteins. | 0 |
| RefSeq | XP_048503746.1 | serine/threonine-protein kinase AFC2-like isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| P51567 | Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana OX=3702 GN=AFC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0J8B2X2 | Protein kinase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_009240 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology