Basic Information
Locus ID:
TC09G0663
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 19003397 | 19011067 | - | TC09G0663 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 103,122.68 Da | 42.70 | 83.26 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 749 | 893 | 1.71566E-52 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 285 | 892 | 2.0E-63 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 282 | 895 | 4.32E-90 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 271 | 537 | 9.2E-47 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 718 | 901 | 2.0E-52 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 284 | 895 | 46.8125 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 285 | 300 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 839 | 856 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 634 | 651 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 651 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_021771249.1 | ubiquitin carboxyl-terminal hydrolase 8-like isoform X1 [Chenopodium quinoa] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9S241 | Ubiquitin carboxyl-terminal hydrolase OS=Spinacia oleracea OX=3562 GN=SOVF_009050 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology