Basic Information
Locus ID:
TC09G0307
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 8936074 | 8938707 | + | TC09G0307 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.83 | 86,561.05 Da | 35.26 | 96.09 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 611 | 785 | 8.1E-23 | IPR000719 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 152 | 188 | 3.0E-6 | IPR025875 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 74 | 2.6E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 602 | 785 | 1.05E-40 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 78 | 365 | 6.75E-48 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 297 | 528 | 1.19E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 189 | 2.5E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 258 | 7.3E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 259 | 536 | 8.6E-76 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 604 | 785 | 2.0E-39 | - |
| SMART | SM00220 | serkin_6 | 610 | 785 | 1.6E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 610 | 785 | 27.015034 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 760 | 772 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 616 | 639 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65710.1 | HAESA-like 2. | 0 |
| RefSeq | XP_002263186.3 | PREDICTED: LRR receptor-like serine/threonine-protein kinase HSL2 [Vitis vinifera] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4S4DPN5 | Protein kinase domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_006707 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology