Basic Information
Locus ID:
TC09G0281
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 8339179 | 8341833 | + | TC09G0281 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.45 | 37,142.67 Da | 45.01 | 67.86 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 64 | 336 | 9.0E-83 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 228 | 326 | 2.75E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 226 | 338 | 1.1E-41 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 228 | 327 | 24.964579 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 193 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65670.2 | indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene | 0 |
| RefSeq | XP_031260494.1 | auxin-responsive protein IAA9 isoform X1 [Pistacia vera] | 0 |
| Q38827 | Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J5AMN7 | Auxin-responsive protein OS=Nyssa sinensis OX=561372 GN=F0562_006158 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology