Basic Information
Locus ID:
TC09G0119
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 3381917 | 3397716 | - | TC09G0119 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 118,077.95 Da | 38.08 | 85.11 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 69 | 345 | 2.69023E-168 | - |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 634 | 847 | 3.1E-47 | IPR011682 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 70 | 381 | 1.5E-91 | IPR000602 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 929 | 1037 | 7.3E-12 | IPR041147 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 386 | 477 | 1.1E-19 | IPR015341 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 64 | 382 | 4.89E-108 | IPR011330 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 494 | 1040 | 9.57E-139 | IPR011013 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 385 | 478 | 2.42E-26 | IPR028995 |
| Gene3D | G3DSA:2.70.98.30 | - | 631 | 895 | 7.0E-94 | - |
| Gene3D | G3DSA:2.60.40.1360 | - | 919 | 1040 | 1.1E-34 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 350 | 427 | 7.6E-30 | IPR037094 |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 69 | 349 | 1.1E-118 | IPR027291 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 428 | 483 | 1.4E-20 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1180 | - | 495 | 606 | 8.8E-26 | IPR013780 |
| SMART | SM00872 | Alpha_mann_mid_2 | 386 | 459 | 2.3E-19 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66150.2 | - | 0 |
| RefSeq | XP_030973365.1 | alpha-mannosidase-like [Quercus lobata] | 0 |
| Q9FKW9 | Probable alpha-mannosidase At5g66150 OS=Arabidopsis thaliana OX=3702 GN=At5g66150 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5B7BPI0 | Alpha-mannosidase OS=Davidia involucrata OX=16924 GN=Din_040311 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology