Basic Information
Locus ID:
TC09G0004
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Zinc finger, C3HC4 type family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 202947 | 254742 | + | TC09G0004 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 36,177.83 Da | 46.64 | 89.32 | 0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 34 | 82 | 3.84293E-17 | - |
| Pfam | PF12906 | RING-variant domain | 34 | 81 | 2.4E-11 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 30 | 86 | 5.65E-15 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 23 | 94 | 8.6E-18 | IPR013083 |
| SMART | SM00744 | ringv_2 | 33 | 82 | 4.2E-18 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 26 | 88 | 21.1047 | IPR011016 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G22120.1 | RING/FYVE/PHD zinc finger superfamily protein. | 0 |
| RefSeq | XP_030534980.1 | uncharacterized protein LOC115744037 [Rhodamnia argentea] | 0 |
| TrEMBL | A0A8B8PJK9 | uncharacterized protein LOC115744037 OS=Rhodamnia argentea OX=178133 GN=LOC115744037 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology