Basic Information
Locus ID:
TC08G2080
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 85269494 | 85271548 | - | TC08G2080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 74,879.37 Da | 33.29 | 86.23 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01476 | LysM domain | 137 | 178 | 0.083 | IPR018392 |
| Pfam | PF01476 | LysM domain | 205 | 242 | 9.2E-4 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 413 | 655 | 2.8E-37 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 367 | 659 | 1.04E-61 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 451 | 675 | 1.8E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 358 | 449 | 3.2E-14 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 365 | 665 | 31.071491 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 274 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 274 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_023912979.1 | protein LYK5 [Quercus suber] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7XPH0 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_022262 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology