Basic Information
Locus ID:
TC08G1817
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 77293435 | 77313678 | - | TC08G1817 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 28,001.23 Da | 40.60 | 81.48 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 118 | 247 | 2.48535E-47 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 118 | 248 | 5.2E-30 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 108 | 248 | 5.1E-43 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 97 | 247 | 1.3E-50 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 118 | 248 | 5.3E-34 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 107 | 248 | 50.111004 | IPR001229 |
| Coils | Coil | Coil | 32 | 52 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73040.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_010690084.1 | jacalin-related lectin 19 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SSM3 | Jacalin-related lectin 19 OS=Arabidopsis thaliana OX=3702 GN=JAL19 PE=2 SV=1 | 0 | |
| TrEMBL | A0A022S1S5 | Jacalin-type lectin domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a014002mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology