Basic Information
Locus ID:
TC08G1524
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
ATPase family associated with various cellular activities (AAA)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 65740498 | 65745895 | - | TC08G1524 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 89,778.19 Da | 43.99 | 82.02 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 493 | 658 | 4.69936E-23 | - |
| Pfam | PF17862 | AAA+ lid domain | 680 | 722 | 8.1E-11 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 527 | 657 | 1.5E-37 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 487 | 754 | 7.19E-58 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 660 | 771 | 4.7E-94 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 487 | 773 | 4.7E-94 | IPR027417 |
| SMART | SM00382 | AAA_5 | 523 | 660 | 7.0E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 630 | 649 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 450 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 720 | 747 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 406 | 477 | - | - |
| Coils | Coil | Coil | 714 | 738 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28000.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_010671575.1 | uncharacterized protein LOC104888335 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A2I4GTV6 | nuclear valosin-containing protein-like OS=Juglans regia OX=51240 GN=LOC109010848 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology