Basic Information
Locus ID:
TC08G0937
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
RING FYVE PHD zinc finger superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 34094557 | 34113114 | + | TC08G0937 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 25,104.63 Da | 60.17 | 73.62 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 107 | 159 | 2.18125E-10 | - |
| Pfam | PF12906 | RING-variant domain | 107 | 158 | 3.5E-9 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 105 | 162 | 1.53E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 93 | 168 | 1.2E-14 | IPR013083 |
| SMART | SM00744 | ringv_2 | 106 | 159 | 1.0E-17 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 99 | 165 | 17.075884 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 64 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G05830.1 | RING/FYVE/PHD zinc finger superfamily protein. | 0 |
| RefSeq | XP_027939111.1 | uncharacterized protein LOC114193485 [Vigna unguiculata] | 0 |
| TrEMBL | A0A5B7AGX7 | RING-CH-type domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_024786 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology