Basic Information
Locus ID:
TC08G0496
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 12886844 | 12889924 | - | TC08G0496 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 66,212.46 Da | 32.09 | 87.74 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 32 | 193 | 1.29188E-91 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 391 | 599 | 3.47325E-85 | - |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 29 | 197 | 6.6E-35 | IPR012001 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 226 | 343 | 1.6E-21 | IPR012000 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 437 | 473 | 1.9E-5 | IPR011766 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 389 | 605 | 2.1E-31 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 221 | 368 | 1.53E-32 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 29 | 205 | 1.61E-44 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 27 | 202 | 2.2E-60 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 216 | 378 | 7.5E-41 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 493 | 598 | 6.1E-26 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 384 | 476 | 1.8E-25 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 492 | 611 | 5.2E-33 | IPR012110 |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 25 | 480 | 1.2E-166 | IPR012110 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_006449474.1 | pyruvate decarboxylase 1 [Citrus clementina] | 0 |
| P51850 | Pyruvate decarboxylase 1 OS=Pisum sativum OX=3888 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A067GDY7 | pyruvate decarboxylase OS=Citrus sinensis OX=2711 GN=CISIN_1g007800mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology