Basic Information
Locus ID:
TC08G0423
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 10475421 | 10501082 | - | TC08G0423 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 69,196.90 Da | 36.36 | 99.01 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 69 | 1.2E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 301 | 569 | 6.4E-42 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 191 | 1.57E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 281 | 572 | 2.29E-73 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 211 | 5.3E-54 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 375 | 585 | 7.1E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 268 | 374 | 2.1E-34 | - |
| SMART | SM00220 | serkin_6 | 299 | 576 | 8.7E-28 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 121 | 143 | 7.33462 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 299 | 575 | 36.498947 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 305 | 327 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 421 | 433 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45780.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_052201436.1 | probable LRR receptor-like serine/threonine-protein kinase At5g45780 isoform X2 [Diospyros lotus] | 0 |
| C0LGU5 | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B7BJL7 | Protein kinase domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_037432 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology