Basic Information
Locus ID:
TC08G0135
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 3300942 | 3308700 | - | TC08G0135 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.96 | 69,482.75 Da | 41.88 | 97.86 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 331 | 600 | 3.0E-48 | IPR001245 |
| Pfam | PF01476 | LysM domain | 63 | 100 | 0.014 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 312 | 602 | 3.78E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 312 | 401 | 3.0E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 402 | 618 | 2.7E-55 | - |
| SMART | SM00220 | serkin_6 | 330 | 605 | 3.9E-42 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 330 | 605 | 39.820438 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 336 | 358 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 446 | 458 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_010657225.1 | PREDICTED: lysM domain receptor-like kinase 3 [Vitis vinifera] | 0 |
| A0A0P0XII1 | Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S1TYF8 | Lysine motif-containing receptor-like kinase 1-1 protein OS=Vitis vinifera OX=29760 GN=LYK1-1 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology