Basic Information
Locus ID:
TC08G0093
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 2438309 | 2441169 | + | TC08G0093 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 57,282.24 Da | 38.16 | 90.61 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 384 | 455 | 4.8E-21 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 47 | 366 | 8.9E-73 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 47 | 366 | 5.9E-80 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 46 | 371 | 1.7E-106 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 377 | 488 | 1.7E-12 | - |
| SMART | SM00768 | X8_cls | 383 | 468 | 3.7E-49 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 281 | 294 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021853052.1 | glucan endo-1,3-beta-glucosidase 1 [Spinacia oleracea] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A0K9QUE2 | X8 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_140130 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology