Basic Information
Locus ID:
TC07G2830
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
PAPA-1-like family protein zinc finger (HIT type) family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 108993465 | 108998132 | + | TC07G2830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.62 | 64,371.43 Da | 54.39 | 59.42 | -0.97 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04438 | HIT zinc finger | 546 | 577 | 8.0E-9 | IPR007529 |
| Pfam | PF04795 | PAPA-1-like conserved region | 446 | 530 | 1.1E-19 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 446 | 531 | 2.9E-26 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 87 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 352 | 504 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 137 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 404 | 418 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 437 | 503 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 137 | - | - |
| Coils | Coil | Coil | 445 | 472 | - | - |
| Coils | Coil | Coil | 485 | 505 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47350.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_021768735.1 | uncharacterized protein LOC110733032 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A8K0DSP1 | PAPA-1 domain-containing protein OS=Rhamnella rubrinervis OX=2594499 GN=FNV43_RR23642 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology