Basic Information
Locus ID:
TC07G2777
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Histone-lysine n-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 107190527 | 107221242 | - | TC07G2777 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.89 | 90,291.72 Da | 47.52 | 71.08 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10519 | SET_EZH | 639 | 755 | 1.18587E-65 | - |
| Pfam | PF00856 | SET domain | 650 | 753 | 4.8E-16 | IPR001214 |
| Pfam | PF18264 | CXC domain | 578 | 609 | 2.4E-8 | IPR041355 |
| SUPERFAMILY | SSF82199 | SET domain | 525 | 757 | 5.23E-52 | - |
| Gene3D | G3DSA:2.170.270.10 | SET domain | 540 | 756 | 4.7E-66 | - |
| SMART | SM00317 | set_7 | 639 | 760 | 2.9E-33 | IPR001214 |
| SMART | SM00717 | sant | 437 | 486 | 0.13 | IPR001005 |
| SMART | SM01114 | CXC_2 | 574 | 611 | 5.3E-6 | IPR033467 |
| SMART | SM00717 | sant | 245 | 295 | 10.0 | IPR001005 |
| ProSiteProfiles | PS50280 | SET domain profile. | 639 | 754 | 15.202489 | IPR001214 |
| ProSiteProfiles | PS51633 | CXC domain profile. | 523 | 625 | 21.169487 | IPR026489 |
| ProSiteProfiles | PS51576 | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 1 | 795 | 195.70285 | IPR025778 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 766 | 783 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 766 | 797 | - | - |
| Coils | Coil | Coil | 62 | 82 | - | - |
| Coils | Coil | Coil | 282 | 302 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Reaction:
R03875 (Protein lysine + S-Adenosyl-L-methionine <=> Protein N6-methyl-L-lysine + S-Adenosyl-L-homocysteine)
R03938 (S-Adenosyl-L-methionine + Histone-L-lysine <=> S-Adenosyl-L-homocysteine + Histone N6-methyl-L-lysine)
R04866 (S-Adenosyl-L-methionine + Protein N6-methyl-L-lysine <=> S-Adenosyl-L-homocysteine + Protein N6,N6-dimethyl-L-lysine)
R04867 (S-Adenosyl-L-methionine + Protein N6,N6-dimethyl-L-lysine <=> S-Adenosyl-L-homocysteine + Protein N6,N6,N6-trimethyl-L-lysine)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02020.1 | SET domain-containing protein. Encodes a polycomb group protein. Forms part of a large protein complex that can include VRN2 (VERNALIZATION 2), VIN3 (VERNALIZATION INSENSITIVE 3) and polycomb group proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE) and CURLY LEAF (CLF). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. Performs a partially redundant role to MEA in controlling seed initiation by helping to suppress central cell nucleusendosperm proliferation within the FG. | 0 |
| RefSeq | XP_047179911.1 | histone-lysine N-methyltransferase EZA1 isoform X5 [Vigna umbellata] | 0 |
| Q9ZSM8 | Histone-lysine N-methyltransferase EZA1 OS=Arabidopsis thaliana OX=3702 GN=EZA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B7BG87 | [histone H3]-lysine(27) N-trimethyltransferase OS=Davidia involucrata OX=16924 GN=Din_037358 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg35113, jg40015 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_15041, gene_19265 |
| Amaranthaceae | Atriplex hortensis | 4 | Ah000105, Ah004342, Ah005404, Ah005405 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_5g106820, BVRB_5g121850 |
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg24543, Sbi_jg31326, Sbi_jg57960, Sbi_jg8391 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg11656, Seu_jg25585 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00004473, GOSA_00010875 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl51274, Sgl54528, Sgl56576, Sgl59869 |
| Amaranthaceae | Chenopodium album | 7 | gene:ENSEOMG00000005614, gene:ENSEOMG00000007252 ... |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.5AG0002010, CQ.Regalona.r1.5AG0027020 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30008100, pistato.v30206130 |
| Apiaceae | Apium graveolens | 4 | Ag4G01104, Ag5G00291, Ag5G02886, Ag9G02327 |
| Arecaceae | Cocos nucifera | 3 | COCNU_08G005060, COCNU_11G000180, COCNU_16G004410 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103696622, gene-LOC103713764, gene-LOC103724029 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_07.1673.V1.1, AsparagusV1_08.1457.V1.1 |
| Asteraceae | Flaveria trinervia | 4 | Ftri10G00317, Ftri15G03347, Ftri17G16197, Ftri18G17065 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT2G23380.1, AT4G02020.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10000037m.g.v1.0, Thhalv10028423m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp4g02390.v2.2, Sp6g01900.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g020410.2N, BniB08g044480.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq05G1333, Ceq06G1050 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl05G1338, Cgl06G1092 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno15g06510, gene.Cymno18g03860 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0011s00040.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate02g09320, gene.Thate05g09090 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG02.2109, evm.TU.LG04.450 |
| Plantaginaceae | Plantago ovata | 3 | Pov_00024947, Pov_00029191, Pov_00029199 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb8G36103, Lb8G36104, Lb8G36105 |
| Poaceae | Echinochloa crus-galli | 6 | AH01.3875, AH06.370, BH01.4213, BH06.488, CH01.4500 ... |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_3AG0245610, gene-QOZ80_3AG0245620 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.4HG0382250.1, HORVU.MOREX.r3.7HG0655900.1 ... |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_028415, gene-QYE76_063025, gene-QYE76_068467 |
| Poaceae | Oryza coarctata | 3 | Oco06G014810, Oco11G007280, Oco12G007370 |
| Poaceae | Oryza sativa | 2 | LOC_Os03g19480.1, LOC_Os06g16390.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_01G377500, gene-BS78_10G055000 |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0102572, Pt_Chr0105706, Pt_Chr0402067, Pt_Chr0402103 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr01G032910, Chr04G009580, Chr11G022110, Chr12G006670 ... |
| Poaceae | Thinopyrum elongatum | 3 | Tel4E01G329400, Tel7E01G260300, Tel7E01G260700 |
| Poaceae | Triticum dicoccoides | 5 | gene_TRIDC4AG017090, gene_TRIDC4BG031660 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS4A02G121300.4, TraesCS4B02G181400.3 ... |
| Poaceae | Zea mays | 3 | Zm00001eb014730_P001, Zm00001eb271490_P005 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-3518, nbis-gene-5096 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g29163, Zma_g3769 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG02.1253, evm.TU.LG09.719, evm.TU.LG10.688 ... |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc07g04650, gene.Posoc07g12580 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_6_RagTag.1859, evm.TU.Scaffold_9_RagTag.749 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-17281, nbisL1-mrna-21472 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-20015, nbisL1-mrna-8423 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-11917, nbisL1-mrna-18542 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000003l.629, evm.TU.utg000011l.1134 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00007791, Maker00009601 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-15493, nbisL1-mrna-1612 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-3234, nbisL1-mrna-5293 |
| Salicaceae | Populus euphratica | 4 | populus_peu14405, populus_peu23376, populus_peu27351 ... |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132616927, gene-LOC132623421, gene-LOC132644930 |
| Solanaceae | Solanum chilense | 3 | SOLCI000735100, SOLCI000869500, SOLCI001076900 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107001506, gene-LOC107011481, gene-LOC107014997 |
| Tamaricaceae | Reaumuria soongarica | 2 | gene_17331, gene_3847 |
| Tamaricaceae | Tamarix chinensis | 3 | TC04G1756, TC07G1795, TC07G2777 |
| Zosteraceae | Zostera marina | 2 | Zosma02g18570.v3.1, Zosma05g30470.v3.1 |