Basic Information
Locus ID:
TC07G2657
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 104132903 | 104138417 | + | TC07G2657 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 45,927.35 Da | 36.63 | 87.96 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 22 | 403 | 5.0E-74 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 17 | 408 | 1.02E-78 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 10 | 403 | 6.6E-98 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 9 | 205 | 8.7E-7 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 350 | 414 | 1.3 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 9 | 405 | 39.065189 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_021680537.1 | homocysteine S-methyltransferase 2-like isoform X1 [Hevea brasiliensis] | 0 |
| Q4VNK0 | Selenocysteine Se-methyltransferase OS=Brassica oleracea var. italica OX=36774 GN=SMT PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7I3V7 | Hcy-binding domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_010682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology