Basic Information
Locus ID:
TC07G2315
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Short Name:
IAA7
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 90959094 | 90960966 | + | TC07G2315 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 27,054.69 Da | 43.21 | 65.91 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 8 | 238 | 7.8E-83 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 127 | 228 | 1.67E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 125 | 241 | 2.2E-42 | - |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 23 | 6.0 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 129 | 229 | 22.70892 | IPR000270 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23050.1 | indole-3-acetic acid 7. Transcription regulator acting as repressor of auxin-inducible gene expression. Plays role in the control of gravitropic growth and development in light-grown seedlings. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components. | 0 |
| RefSeq | XP_010512022.1 | PREDICTED: auxin-responsive protein IAA7 [Camelina sativa] | 0 |
| Q38825 | Auxin-responsive protein IAA7 OS=Arabidopsis thaliana OX=3702 GN=IAA7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5S9XEX8 | Auxin-responsive protein OS=Arabidopsis thaliana OX=3702 GN=C24_LOCUS13600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology