Basic Information
Locus ID:
TC07G1734
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 58841631 | 58845116 | - | TC07G1734 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.48 | 65,070.11 Da | 54.06 | 58.48 | -1.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04438 | HIT zinc finger | 541 | 572 | 5.5E-8 | IPR007529 |
| Pfam | PF04795 | PAPA-1-like conserved region | 441 | 525 | 1.6E-19 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 441 | 526 | 8.9E-27 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 498 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 83 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 315 | 499 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 216 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 336 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 87 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 105 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 401 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 296 | - | - |
| Coils | Coil | Coil | 479 | 500 | - | - |
| Coils | Coil | Coil | 430 | 467 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47350.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_021768735.1 | uncharacterized protein LOC110733032 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A6P4AC14 | uncharacterized protein LOC107426162 OS=Ziziphus jujuba OX=326968 GN=LOC107426162 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology