Basic Information
Locus ID:
TC07G1378
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 42358786 | 42361990 | + | TC07G1378 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 112,062.26 Da | 35.55 | 99.91 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 100 | 159 | 7.0E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 764 | 992 | 1.2E-33 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 509 | 568 | 1.4E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 71 | 1.3E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 245 | 305 | 6.9E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 273 | 598 | 4.79E-53 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 79 | 384 | 4.08E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 687 | 993 | 6.01E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 679 | 798 | 7.2E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 269 | 625 | 3.0E-96 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 799 | 1014 | 5.2E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 190 | 1.1E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 268 | 7.4E-15 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 243 | 267 | 74.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 146 | 169 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 292 | 316 | 360.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 507 | 531 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 98 | 122 | 49.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 695 | 1017 | 2.8E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 695 | 997 | 34.732197 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 701 | 724 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 845 | 857 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_021837998.1 | receptor-like protein kinase HSL1 [Spinacia oleracea] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A4L4W4 | Protein kinase domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_15555 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology