HalophFGD

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Basic Information
Locus ID: TC07G0930
Species & Taxonomic ID: Tamarix chinensis & 189791
Genome Assembly: GCA_030549775.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr7 26427650 26431137 + TC07G0930
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.66 51,647.49 Da 50.51 68.73 -0.76
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 64 95 - -
MobiDBLite mobidb-lite consensus disorder prediction 124 138 - -
MobiDBLite mobidb-lite consensus disorder prediction 398 472 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 52 - -
MobiDBLite mobidb-lite consensus disorder prediction 409 426 - -
MobiDBLite mobidb-lite consensus disorder prediction 118 138 - -
MobiDBLite mobidb-lite consensus disorder prediction 26 42 - -
MobiDBLite mobidb-lite consensus disorder prediction 10 25 - -
Coils Coil Coil 260 294 - -
Best hit
Source Best Hit ID Description E-value
TAIR AT5G01970.1 0
RefSeq XP_034692790.1 uncharacterized protein LOC117919676 [Vitis riparia] 0
TrEMBL F6HMS8 Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0056g00430 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 6 jg14674, jg16733, jg35295, jg8424, jg8425, jg8803
Aizoaceae Mesembryanthemum crystallinum 3 gene_14610, gene_24327, gene_6203
Amaranthaceae Atriplex hortensis 4 Ah012131, Ah029575, Ah031584, Ah035376
Amaranthaceae Beta vulgaris 2 BVRB_7g156590, BVRB_7g172790
Amaranthaceae Salicornia bigelovii 6 Sbi_jg2103, Sbi_jg21488, Sbi_jg22327, Sbi_jg26745 ...
Sbi_jg33810, Sbi_jg34410
Amaranthaceae Salicornia europaea 3 Seu_jg16258, Seu_jg2666, Seu_jg8508
Amaranthaceae Suaeda aralocaspica 3 GOSA_00003684, GOSA_00005827, GOSA_00008843
Amaranthaceae Suaeda glauca 6 Sgl01636, Sgl06798, Sgl62801, Sgl67417, Sgl71156, Sgl74738
Amaranthaceae Chenopodium album 8 gene:ENSEOMG00000006787, gene:ENSEOMG00000007709 ...
gene:ENSEOMG00000017263, gene:ENSEOMG00000019085, gene:ENSEOMG00000037128, gene:ENSEOMG00000038627, gene:ENSEOMG00000040003, gene:ENSEOMG00000049366
Amaranthaceae Chenopodium quinoa 6 CQ.Regalona.r1.1BG0020310, CQ.Regalona.r1.2AG0022060 ...
CQ.Regalona.r1.7AG0015630, CQ.Regalona.r1.7AG0023380, CQ.Regalona.r1.7BG0019020, CQ.Regalona.r1.7BG0026050
Anacardiaceae Pistacia vera 3 pistato.v30027220, pistato.v30082800, pistato.v30131790
Apiaceae Apium graveolens 5 Ag10G01012, Ag11G04060, Ag2G01233, Ag9G02150, Ag9G02312
Arecaceae Cocos nucifera 7 COCNU_04G012220, COCNU_07G015120, COCNU_10G009500 ...
COCNU_12G006070, COCNU_16G005540, scaffold005796G000010, scaffold037569G000010
Arecaceae Phoenix dactylifera 3 gene-LOC103702166, gene-LOC103705919, gene-LOC103716692
Asparagaceae Asparagus officinalis 6 AsparagusV1_02.1619.V1.1, AsparagusV1_04.3358.V1.1 ...
AsparagusV1_05.584.V1.1, AsparagusV1_07.3135.V1.1, AsparagusV1_07.743.V1.1, AsparagusV1_08.3305.V1.1
Asteraceae Flaveria trinervia 7 Ftri10G00984, Ftri10G25066, Ftri10G32763, Ftri11G00535 ...
Ftri15G26144, Ftri9G09186, Ftri9G09821
Brassicaceae Arabidopsis thaliana 4 AT1G30050.1, AT2G30530.1, AT4G02800.1, AT5G01970.1
Brassicaceae Eutrema salsugineum 4 Thhalv10007824m.g.v1.0, Thhalv10013951m.g.v1.0 ...
Thhalv10016861m.g.v1.0, Thhalv10028780m.g.v1.0
Brassicaceae Schrenkiella parvula 4 Sp1g25920.v2.2, Sp4g13080.v2.2, Sp6g02830.v2.2 ...
Sp6g41210.v2.2
Brassicaceae Brassica nigra 7 BniB01g013690.2N, BniB03g016330.2N, BniB03g034260.2N ...
BniB04g045370.2N, BniB08g019020.2N, BniB08g039350.2N, BniB08g039380.2N
Casuarinaceae Casuarina equisetifolia 3 Ceq06G2117, Ceq08G0857, Ceq08G2473
Casuarinaceae Casuarina glauca 3 Cgl06G2229, Cgl08G0875, Cgl08G2714
Cymodoceaceae Cymodocea nodosa 3 gene.Cymno02g00980, gene.Cymno03g04450, gene.Cymno05g12950
Dunaliellaceae Dunaliella salina 1 Dusal.0361s00011.v1.0
Hydrocharitaceae Thalassia testudinum 3 gene.Thate06g06290, gene.Thate07g00500, gene.Thate08g04060
Malvaceae Hibiscus hamabo Siebold & Zucc. 6 nbisL1-mrna-12516, nbisL1-mrna-2161, nbisL1-mrna-4516 ...
nbisL1-mrna-4864, nbisL1-mrna-5356, nbisL1-mrna-633
Nitrariaceae Nitraria sibirica 3 evm.TU.LG01.518, evm.TU.LG01.828, evm.TU.LG04.1062
Plantaginaceae Plantago ovata 4 Pov_00002577, Pov_00008083, Pov_00008084, Pov_00036714
Plumbaginaceae Limonium bicolor 3 Lb4G22591, Lb4G22603, Lb4G25695
Poaceae Echinochloa crus-galli 14 AH04.96, AH05.20, AH05.2004, AH05.3063, AH07.3290, BH04.104 ...
BH05.2145, BH05.3105, BH05.50, BH07.3109, CH05.2208, CH05.3149, CH05.84, CH07.3176
Poaceae Eleusine coracana subsp. coracana 9 gene-QOZ80_4AG0325270, gene-QOZ80_4BG0354860 ...
gene-QOZ80_5AG0369130, gene-QOZ80_5AG0377880, gene-QOZ80_5BG0416750, gene-QOZ80_5BG0424990, gene-QOZ80_5BG0433560, gene-QOZ80_9AG0672700, gene-QOZ80_9BG0696320
Poaceae Hordeum vulgare 4 HORVU.MOREX.r3.1HG0032710.1, HORVU.MOREX.r3.1HG0070620.1 ...
HORVU.MOREX.r3.2HG0104690.1, HORVU.MOREX.r3.4HG0353200.1
Poaceae Oryza coarctata 11 Oco07G001740, Oco08G002200, Oco09G006420, Oco09G012440 ...
Oco10G006630, Oco10G012530, Oco22G000650, Oco23G000110, Oco23G000630, Ocoptg000086lG000050, Ocoptg000139lG000020
Poaceae Oryza sativa 5 LOC_Os04g15800.1, LOC_Os05g25070.1, LOC_Os05g40310.1 ...
LOC_Os11g02640.1, LOC_Os12g02570.1
Poaceae Paspalum vaginatum 4 gene-BS78_04G070400, gene-BS78_08G016300 ...
gene-BS78_09G090400, gene-BS78_09G181600
Poaceae Puccinellia tenuiflora 8 Pt_Chr0103779, Pt_Chr0108035, Pt_Chr0303626, Pt_Chr0305809 ...
Pt_Chr0501300, Pt_Chr0501337, Pt_Chr0504533, Pt_Chr0504545
Poaceae Sporobolus alterniflorus 11 Chr07G022080, Chr17G009120, Chr18G006510, Chr18G012350 ...
Chr22G005410, Chr22G011540, Chr23G017060, Chr25G014060, Chr26G002790, Chr30G014110, Chr31G000420
Poaceae Thinopyrum elongatum 5 Tel1E01G235100, Tel1E01G490200, Tel2E01G149500 ...
Tel2E01G150500, Tel4E01G195600
Poaceae Triticum dicoccoides 8 gene_TRIDC1AG018500, gene_TRIDC1AG044970 ...
gene_TRIDC1BG023390, gene_TRIDC1BG050980, gene_TRIDC2AG007450, gene_TRIDC2BG008610, gene_TRIDC4AG030780, gene_TRIDC4BG019100
Poaceae Triticum aestivum 12 TraesCS1A02G128300.1, TraesCS1A02G303000.2 ...
TraesCS1B02G146700.2, TraesCS1B02G313300.1, TraesCS1D02G124900.2, TraesCS1D02G302400.1, TraesCS2A02G067400.1, TraesCS2B02G079600.1, TraesCS2D02G065700.1, TraesCS4A02G192700.1, TraesCS4B02G122600.2, TraesCS4D02G120600.1
Poaceae Zea mays 5 Zm00001eb086650_P001, Zm00001eb163810_P001 ...
Zm00001eb290930_P001, Zm00001eb350740_P002, Zm00001eb352110_P004
Poaceae Zoysia japonica 8 nbis-gene-14267, nbis-gene-21641, nbis-gene-25360 ...
nbis-gene-26975, nbis-gene-32222, nbis-gene-34926, nbis-gene-42165, nbis-gene-47909
Poaceae Zoysia macrostachya 5 Zma_g18349, Zma_g20989, Zma_g26985, Zma_g28042, Zma_g28454
Portulacaceae Portulaca oleracea 5 evm.TU.LG10.13, evm.TU.LG14.1839, evm.TU.LG16.1539 ...
evm.TU.LG17.10, evm.TU.LG26.124
Posidoniaceae Posidonia oceanica 3 gene.Posoc01g27610, gene.Posoc02g10050, gene.Posoc02g33050
Rhizophoraceae Bruguiera sexangula 4 evm.TU.Scaffold_14_RagTag.800, evm.TU.Scaffold_1_RagTag.1061 ...
evm.TU.Scaffold_2_RagTag.1287, evm.TU.Scaffold_5_RagTag.978
Rhizophoraceae Carallia pectinifolia 6 nbisL1-mrna-11365, nbisL1-mrna-16380, nbisL1-mrna-21300 ...
nbisL1-mrna-3932, nbisL1-mrna-3949, nbisL1-mrna-6543
Rhizophoraceae Ceriops tagal 4 nbisL1-mrna-13633, nbisL1-mrna-19903, nbisL1-mrna-3778 ...
nbisL1-mrna-6703
Rhizophoraceae Ceriops zippeliana 5 nbisL1-mrna-11595, nbisL1-mrna-17130, nbisL1-mrna-18731 ...
nbisL1-mrna-18732, nbisL1-mrna-21146
Rhizophoraceae Kandelia candel 4 add.evm.TU.utg000009l.158, evm.TU.utg000006l.299 ...
evm.TU.utg000016l.874, evm.TU.utg000025l.29
Rhizophoraceae Kandelia obovata 3 Maker00012252, Maker00013466, Maker00016966
Rhizophoraceae Rhizophora apiculata 4 nbisL1-mrna-11058, nbisL1-mrna-15879, nbisL1-mrna-17305 ...
nbisL1-mrna-9990
Rhizophoraceae Rhizophora mangle 5 nbisL1-mrna-13271, nbisL1-mrna-24761, nbisL1-mrna-5143 ...
nbisL1-mrna-7600, nbisL1-mrna-8969
Salicaceae Populus euphratica 6 populus_peu11542, populus_peu14516, populus_peu15034 ...
populus_peu17037, populus_peu25221, populus_peu32695
Solanaceae Lycium barbarum 4 gene-LOC132605273, gene-LOC132605599, gene-LOC132631240 ...
gene-LOC132644086
Solanaceae Solanum chilense 3 SOLCI004634600, SOLCI006272200, SOLCI006761300
Solanaceae Solanum pennellii 4 gene-LOC107002575, gene-LOC107021605, gene-LOC107030178 ...
gene-LOC107031661
Tamaricaceae Reaumuria soongarica 3 STRG.1608_chr01_+, gene_3669, gene_4273
Tamaricaceae Tamarix chinensis 3 TC06G1220, TC07G0930, TC11G2420
Zosteraceae Zostera marina 4 Zosma01g29070.v3.1, Zosma03g30470.v3.1, Zosma04g20640.v3.1 ...
Zosma05g24940.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.