halophFGD

Basic Information

Locus ID: TC07G0691

Species & Taxonomic ID: Tamarix chinensis & 189791

Genome Assembly: GCA_030549775.1

Description: Ubiquitin domain-containing protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr7	18408556	18409240	-	TC07G0691

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.05	14,294.10 Da	34.64	87.10	-0.47

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00240	Ubiquitin family	54	122	2.1E-5	IPR000626
SUPERFAMILY	SSF54236	Ubiquitin-like	40	123	6.56E-14	IPR029071
Gene3D	G3DSA:3.10.20.90	-	51	123	6.8E-11	-
ProSiteProfiles	PS50053	Ubiquitin domain profile.	52	124	12.68338	IPR000626

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K04523 (ubiquilin)

Pathway:

ko04141 (Protein processing in endoplasmic reticulum) map04141 (Protein processing in endoplasmic reticulum)

Best hit

Source	Best Hit ID	Description	E-value

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Tamaricaceae	Reaumuria soongarica	1	MSTRG.1577_chr01_+
Tamaricaceae	Tamarix chinensis	1	TC07G0691