Basic Information
Locus ID:
TC07G0546
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Short Name:
AFC1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 14910723 | 14917342 | + | TC07G0546 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.37 | 54,546.34 Da | 43.76 | 83.81 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14134 | PKc_CLK | 90 | 431 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 103 | 431 | 2.6E-50 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 90 | 438 | 1.84E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 157 | 431 | 7.9E-109 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 90 | 183 | 7.9E-109 | - |
| SMART | SM00220 | serkin_6 | 103 | 431 | 5.1E-77 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 103 | 431 | 38.392902 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 224 | 236 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 109 | 132 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53570.3 | FUS3-complementing gene 1. a member of a CDC2-related kinase subfamily, the LAMMER kinases. activates STE12-dependent functions in yeast. | 0 |
| RefSeq | XP_015899521.1 | serine/threonine-protein kinase AFC1 [Ziziphus jujuba var. spinosa] | 0 |
| P51566 | Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana OX=3702 GN=AFC1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6P4AUX6 | serine/threonine-protein kinase AFC1 OS=Ziziphus jujuba OX=326968 GN=LOC107432833 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology