Basic Information
Locus ID:
TC06G2513
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 100783911 | 100795358 | + | TC06G2513 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 45,017.71 Da | 39.77 | 105.40 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 77 | 345 | 4.7E-84 | IPR013765 |
| SUPERFAMILY | SSF54752 | RecA protein, C-terminal domain | 348 | 401 | 2.35E-5 | IPR023400 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 79 | 345 | 1.51E-39 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 104 | 406 | 5.7E-85 | IPR027417 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 276 | 350 | 21.021181 | IPR020587 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 105 | 269 | 23.990023 | IPR020588 |
| PRINTS | PR00142 | RecA protein signature | 240 | 269 | 2.2E-62 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 321 | 350 | 2.2E-62 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 202 | 231 | 2.2E-62 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 168 | 197 | 2.2E-62 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 374 | 391 | 2.2E-62 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 288 | 316 | 2.2E-62 | IPR013765 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10140.1 | RECA homolog 3. | 0 |
| RefSeq | XP_028091697.1 | DNA repair protein recA homolog 2, mitochondrial isoform X1 [Camellia sinensis] | 0 |
| Q8RY99 | DNA repair protein recA homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g10140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2R6RY87 | DNA repair protein recA 2 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc03939 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology