Basic Information
Locus ID:
TC06G2438
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 98238176 | 98241325 | + | TC06G2438 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.60 | 59,629.62 Da | 33.23 | 82.83 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 432 | 494 | 3.21925E-17 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 55 | 312 | 4.4765E-141 | - |
| Pfam | PF00069 | Protein kinase domain | 55 | 313 | 3.6E-76 | IPR000719 |
| Pfam | PF13833 | EF-hand domain pair | 372 | 420 | 3.9E-7 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 431 | 494 | 3.6E-14 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 337 | 506 | 1.92E-43 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 55 | 321 | 5.13E-87 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 57 | 140 | 4.7E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 141 | 321 | 1.9E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 322 | 496 | 2.6E-50 | - |
| SMART | SM00054 | efh_1 | 396 | 424 | 0.96 | IPR002048 |
| SMART | SM00054 | efh_1 | 468 | 496 | 1.8E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 360 | 388 | 0.51 | IPR002048 |
| SMART | SM00220 | serkin_6 | 55 | 313 | 1.9E-101 | IPR000719 |
| SMART | SM00054 | efh_1 | 432 | 460 | 0.038 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 55 | 313 | 50.364403 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 392 | 427 | 10.468573 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 464 | 499 | 14.652882 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 356 | 391 | 12.811786 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 428 | 463 | 11.807551 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 175 | 187 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 477 | 489 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 61 | 84 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 441 | 453 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 405 | 417 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_021893397.1 | calcium-dependent protein kinase 32 [Carica papaya] | 0 |
| Q42438 | Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CPK8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J1A493 | calcium-dependent protein kinase 32-like OS=Herrania umbratica OX=108875 GN=LOC110414620 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology