Basic Information
Locus ID:
TC06G2415
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Chaperone protein DNAj
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 96952083 | 96959938 | + | TC06G2415 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.62 | 32,851.44 Da | 42.41 | 62.15 | -1.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 39 | 91 | 1.41847E-21 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 38 | 99 | 6.0E-25 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 36 | 115 | 3.14E-25 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 23 | 122 | 4.8E-27 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 36 | 94 | 4.7E-26 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 37 | 102 | 21.331009 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 57 | 72 | 4.8E-20 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 94 | 113 | 4.8E-20 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 74 | 94 | 4.8E-20 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 39 | 57 | 4.8E-20 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 204 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12170.1 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_034693002.1 | chaperone protein dnaJ 6 [Vitis riparia] | 0 |
| Q9FL54 | Chaperone protein dnaJ 6 OS=Arabidopsis thaliana OX=3702 GN=ATJ6 PE=2 SV=1 | 0 | |
| TrEMBL | D7TI11 | J domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g07960 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg31310, jg33270, jg33271, jg4369 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_4683 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah021697 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g061010 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg59256, Sbi_jg63376 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg23516 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00018419 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl23764 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000014064, gene:ENSEOMG00000031758 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0020390, CQ.Regalona.r1.3BG0021270 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30187080 |
| Apiaceae | Apium graveolens | 2 | Ag2G01497, Ag3G01494 |
| Arecaceae | Cocos nucifera | 1 | COCNU_01G012110 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103720332, gene-LOC103723827 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.3323.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G13581 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT3G12170.1, AT5G06910.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10014343m.g.v1.0, Thhalv10021344m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g10410.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB01g052720.2N, BniB03g069000.2N, BniB07g056500.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G1107 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G1276 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno05g01500 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0128s00019.v1.0, Dusal.0128s00020.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g07360 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-8462, nbisL1-mrna-8466 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2443 |
| Plantaginaceae | Plantago ovata | 3 | Pov_00006617, Pov_00017495, Pov_00025836 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb3G16270, Lb3G16271 |
| Poaceae | Echinochloa crus-galli | 5 | AH07.710, BH07.840, CH01.1510, CH07.3, CH07.598 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0104990, gene-QOZ80_2BG0158420 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0573240.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_021311 |
| Poaceae | Oryza coarctata | 2 | Oco03G004980, Oco04G004940 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g10220.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G073800 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0202138, Pt_Chr0202181 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr06G033190, Chr15G024580 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G332400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG022360, gene_TRIDC6BG029000 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G158600.1, TraesCS6B02G192700.1 ... |
| Poaceae | Zea mays | 4 | Zm00001eb139200_P001, Zm00001eb205970_P003 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-33482, nbis-gene-44081 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g12379, Zma_g15129 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG07.522, evm.TU.LG15.423 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g03300 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_1_RagTag.1206, evm.TU.Scaffold_2_RagTag.1143 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-3783, nbisL1-mrna-6416 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-16267 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-18857, nbisL1-mrna-4225 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000009l.546 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00005979 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-10967, nbisL1-mrna-12450 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-13397, nbisL1-mrna-5590 |
| Salicaceae | Populus euphratica | 2 | populus_peu11000, populus_peu26135 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132607500, gene-LOC132633961 |
| Solanaceae | Solanum chilense | 1 | SOLCI003450000 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107002724 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.6955_chr04_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC06G2415 |
| Zosteraceae | Zostera marina | 7 | Zosma01g41610.v3.1, Zosma01g41650.v3.1, Zosma03g12370.v3.1 ... |