Basic Information
Locus ID:
TC06G2329
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 94470053 | 94473055 | - | TC06G2329 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 89,145.08 Da | 38.09 | 83.51 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 19 | 279 | 1.81375E-96 | - |
| Pfam | PF00183 | Hsp90 protein | 261 | 771 | 7.0E-237 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 32 | 124 | 7.9E-7 | IPR003594 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 10 | 99 | 1.22E-27 | IPR036890 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 166 | 290 | 2.2E-40 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 619 | 741 | 1.83E-38 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 340 | 595 | 2.05E-109 | IPR020568 |
| Gene3D | G3DSA:1.20.120.790 | - | 595 | 746 | 1.1E-65 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 2 | 106 | 1.4E-34 | IPR036890 |
| Gene3D | G3DSA:3.30.565.10 | - | 163 | 305 | 3.2E-55 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 508 | 594 | 5.0E-42 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 339 | 507 | 1.8E-86 | - |
| PIRSF | PIRSF002583 | HSP90_HTPG | 1 | 99 | 5.8E-33 | IPR001404 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 164 | 775 | 2.1E-221 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 30 | 39 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 80 | 97 | 5.4E-30 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 31 | 53 | 5.4E-30 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 10 | 30 | 5.4E-30 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 7 | 742 | 25.608566 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 750 | 775 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 748 | 775 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 325 | - | - |
| Coils | Coil | Coil | 600 | 620 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52640.1 | heat shock protein 90.1. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. | 0 |
| RefSeq | XP_028127460.1 | heat shock protein 83 [Camellia sinensis] | 0 |
| P51819 | Heat shock protein 83 OS=Ipomoea nil OX=35883 GN=HSP83A PE=2 SV=1 | 0 | |
| TrEMBL | A0A2G9HRZ0 | Molecular chaperone (HSP90 family) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_07020 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology