Basic Information
Locus ID:
TC06G1901
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 73971528 | 73975105 | + | TC06G1901 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.23 | 74,385.85 Da | 35.97 | 94.97 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 417 | 672 | 4.60702E-87 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 66 | 1.9E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 416 | 673 | 3.4E-36 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 142 | 201 | 5.0E-10 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 236 | 6.8E-41 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 392 | 675 | 3.9E-55 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 385 | 489 | 6.7E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 140 | 251 | 2.5E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 139 | 2.0E-28 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 491 | 681 | 3.7E-39 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 411 | 684 | 26.704086 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010671985.2 | probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Beta vulgaris subsp. vulgaris] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A438CH70 | Protein NSP-interacting kinase 2 OS=Vitis vinifera OX=29760 GN=NIK2_4 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology