Basic Information
Locus ID:
TC06G1293
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
F-box Kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 43969550 | 43970629 | - | TC06G1293 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 40,220.57 Da | 52.21 | 71.17 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 167 | 212 | 2.1E-10 | IPR006652 |
| Pfam | PF00646 | F-box domain | 16 | 55 | 7.3E-4 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 121 | 164 | 1.5E-5 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 90 | 277 | 8.11E-39 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 10 | 55 | 1.1E-7 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 37 | 316 | 6.7E-38 | IPR015915 |
| SMART | SM00612 | kelc_smart | 178 | 225 | 4.0E-4 | IPR006652 |
| SMART | SM00612 | kelc_smart | 129 | 177 | 9.7E-5 | IPR006652 |
| SMART | SM00256 | fbox_2 | 16 | 56 | 0.0015 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_034694815.1 | F-box/kelch-repeat protein At2g44130-like [Vitis riparia] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A4D6EWE6 | F-box containing Kelch repeat 2 OS=Persicaria minor OX=488003 GN=FBK2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology