Basic Information
Locus ID:
TC06G1252
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 42202291 | 42206361 | - | TC06G1252 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.08 | 108,168.55 Da | 31.18 | 101.31 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 706 | 979 | 2.8E-46 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 73 | 5.7E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 698 | 979 | 8.9E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 335 | 638 | 2.38E-49 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 63 | 361 | 5.1E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 143 | 6.8E-25 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 782 | 988 | 6.6E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 668 | 781 | 4.1E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 235 | 6.0E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 236 | 339 | 5.4E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 343 | 639 | 1.7E-83 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 438 | 462 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 100 | 124 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 566 | 590 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 342 | 366 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 518 | 542 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 197 | 221 | 81.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 270 | 294 | 170.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 470 | 496 | 93.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 100 | 126 | 54.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 197 | 223 | 300.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 149 | 181 | 300.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 542 | 568 | 37.0 | - |
| SMART | SM00220 | serkin_6 | 703 | 979 | 2.0E-32 | IPR000719 |
| SMART | SM00365 | LRR_sd22_2 | 270 | 296 | 230.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 703 | 989 | 36.640289 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 826 | 838 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20270.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. | 0 |
| RefSeq | XP_041025729.1 | leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 isoform X2 [Juglans microcarpa x Juglans regia] | 0 |
| O65440 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabidopsis thaliana OX=3702 GN=BAM3 PE=1 SV=3 | 0 | |
| TrEMBL | A0A067GBX9 | Protein kinase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g012213mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology