halophFGD

Basic Information

Locus ID: TC06G1220

Species & Taxonomic ID: Tamarix chinensis & 189791

Genome Assembly: GCA_030549775.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr6	41017748	41019186	-	TC06G1220

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.71	41,593.43 Da	54.73	66.42	-0.89

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	123	169	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	322	372	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	120	197	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	181	197	-	-
Coils	Coil	Coil	266	286	-	-

Best hit

Source	Best Hit ID	Description
TAIR	AT4G02800.1
RefSeq	XP_034689823.1	uncharacterized protein LOC117917606 [Vitis riparia]
TrEMBL	D7TPB2	BZIP domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_07s0104g00500 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	6	jg14674, jg16733, jg35295, jg8424, jg8425, jg8803
Aizoaceae	Mesembryanthemum crystallinum	3	gene_14610, gene_24327, gene_6203
Amaranthaceae	Atriplex hortensis	4	Ah012131, Ah029575, Ah031584, Ah035376
Amaranthaceae	Beta vulgaris	2	BVRB_7g156590, BVRB_7g172790
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg2103, Sbi_jg21488, Sbi_jg22327, Sbi_jg26745 ... Sbi_jg33810, Sbi_jg34410
Amaranthaceae	Salicornia europaea	3	Seu_jg16258, Seu_jg2666, Seu_jg8508
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00003684, GOSA_00005827, GOSA_00008843
Amaranthaceae	Suaeda glauca	6	Sgl01636, Sgl06798, Sgl62801, Sgl67417, Sgl71156, Sgl74738
Amaranthaceae	Chenopodium album	8	gene:ENSEOMG00000006787, gene:ENSEOMG00000007709 ... gene:ENSEOMG00000017263, gene:ENSEOMG00000019085, gene:ENSEOMG00000037128, gene:ENSEOMG00000038627, gene:ENSEOMG00000040003, gene:ENSEOMG00000049366
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.1BG0020310, CQ.Regalona.r1.2AG0022060 ... CQ.Regalona.r1.7AG0015630, CQ.Regalona.r1.7AG0023380, CQ.Regalona.r1.7BG0019020, CQ.Regalona.r1.7BG0026050
Anacardiaceae	Pistacia vera	3	pistato.v30027220, pistato.v30082800, pistato.v30131790
Apiaceae	Apium graveolens	5	Ag10G01012, Ag11G04060, Ag2G01233, Ag9G02150, Ag9G02312
Arecaceae	Cocos nucifera	7	COCNU_04G012220, COCNU_07G015120, COCNU_10G009500 ... COCNU_12G006070, COCNU_16G005540, scaffold005796G000010, scaffold037569G000010
Arecaceae	Phoenix dactylifera	3	gene-LOC103702166, gene-LOC103705919, gene-LOC103716692
Asparagaceae	Asparagus officinalis	6	AsparagusV1_02.1619.V1.1, AsparagusV1_04.3358.V1.1 ... AsparagusV1_05.584.V1.1, AsparagusV1_07.3135.V1.1, AsparagusV1_07.743.V1.1, AsparagusV1_08.3305.V1.1
Asteraceae	Flaveria trinervia	7	Ftri10G00984, Ftri10G25066, Ftri10G32763, Ftri11G00535 ... Ftri15G26144, Ftri9G09186, Ftri9G09821
Brassicaceae	Arabidopsis thaliana	4	AT1G30050.1, AT2G30530.1, AT4G02800.1, AT5G01970.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10007824m.g.v1.0, Thhalv10013951m.g.v1.0 ... Thhalv10016861m.g.v1.0, Thhalv10028780m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp1g25920.v2.2, Sp4g13080.v2.2, Sp6g02830.v2.2 ... Sp6g41210.v2.2
Brassicaceae	Brassica nigra	7	BniB01g013690.2N, BniB03g016330.2N, BniB03g034260.2N ... BniB04g045370.2N, BniB08g019020.2N, BniB08g039350.2N, BniB08g039380.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq06G2117, Ceq08G0857, Ceq08G2473
Casuarinaceae	Casuarina glauca	3	Cgl06G2229, Cgl08G0875, Cgl08G2714
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno02g00980, gene.Cymno03g04450, gene.Cymno05g12950
Dunaliellaceae	Dunaliella salina	1	Dusal.0361s00011.v1.0
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate06g06290, gene.Thate07g00500, gene.Thate08g04060
Malvaceae	Hibiscus hamabo Siebold & Zucc.	6	nbisL1-mrna-12516, nbisL1-mrna-2161, nbisL1-mrna-4516 ... nbisL1-mrna-4864, nbisL1-mrna-5356, nbisL1-mrna-633
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG01.518, evm.TU.LG01.828, evm.TU.LG04.1062
Plantaginaceae	Plantago ovata	4	Pov_00002577, Pov_00008083, Pov_00008084, Pov_00036714
Plumbaginaceae	Limonium bicolor	3	Lb4G22591, Lb4G22603, Lb4G25695
Poaceae	Echinochloa crus-galli	14	AH04.96, AH05.20, AH05.2004, AH05.3063, AH07.3290, BH04.104 ... BH05.2145, BH05.3105, BH05.50, BH07.3109, CH05.2208, CH05.3149, CH05.84, CH07.3176
Poaceae	Eleusine coracana subsp. coracana	9	gene-QOZ80_4AG0325270, gene-QOZ80_4BG0354860 ... gene-QOZ80_5AG0369130, gene-QOZ80_5AG0377880, gene-QOZ80_5BG0416750, gene-QOZ80_5BG0424990, gene-QOZ80_5BG0433560, gene-QOZ80_9AG0672700, gene-QOZ80_9BG0696320
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.1HG0032710.1, HORVU.MOREX.r3.1HG0070620.1 ... HORVU.MOREX.r3.2HG0104690.1, HORVU.MOREX.r3.4HG0353200.1
Poaceae	Oryza coarctata	11	Oco07G001740, Oco08G002200, Oco09G006420, Oco09G012440 ... Oco10G006630, Oco10G012530, Oco22G000650, Oco23G000110, Oco23G000630, Ocoptg000086lG000050, Ocoptg000139lG000020
Poaceae	Oryza sativa	5	LOC_Os04g15800.1, LOC_Os05g25070.1, LOC_Os05g40310.1 ... LOC_Os11g02640.1, LOC_Os12g02570.1
Poaceae	Paspalum vaginatum	4	gene-BS78_04G070400, gene-BS78_08G016300 ... gene-BS78_09G090400, gene-BS78_09G181600
Poaceae	Puccinellia tenuiflora	8	Pt_Chr0103779, Pt_Chr0108035, Pt_Chr0303626, Pt_Chr0305809 ... Pt_Chr0501300, Pt_Chr0501337, Pt_Chr0504533, Pt_Chr0504545
Poaceae	Sporobolus alterniflorus	11	Chr07G022080, Chr17G009120, Chr18G006510, Chr18G012350 ... Chr22G005410, Chr22G011540, Chr23G017060, Chr25G014060, Chr26G002790, Chr30G014110, Chr31G000420
Poaceae	Thinopyrum elongatum	5	Tel1E01G235100, Tel1E01G490200, Tel2E01G149500 ... Tel2E01G150500, Tel4E01G195600
Poaceae	Triticum dicoccoides	8	gene_TRIDC1AG018500, gene_TRIDC1AG044970 ... gene_TRIDC1BG023390, gene_TRIDC1BG050980, gene_TRIDC2AG007450, gene_TRIDC2BG008610, gene_TRIDC4AG030780, gene_TRIDC4BG019100
Poaceae	Triticum aestivum	12	TraesCS1A02G128300.1, TraesCS1A02G303000.2 ... TraesCS1B02G146700.2, TraesCS1B02G313300.1, TraesCS1D02G124900.2, TraesCS1D02G302400.1, TraesCS2A02G067400.1, TraesCS2B02G079600.1, TraesCS2D02G065700.1, TraesCS4A02G192700.1, TraesCS4B02G122600.2, TraesCS4D02G120600.1
Poaceae	Zea mays	5	Zm00001eb086650_P001, Zm00001eb163810_P001 ... Zm00001eb290930_P001, Zm00001eb350740_P002, Zm00001eb352110_P004
Poaceae	Zoysia japonica	8	nbis-gene-14267, nbis-gene-21641, nbis-gene-25360 ... nbis-gene-26975, nbis-gene-32222, nbis-gene-34926, nbis-gene-42165, nbis-gene-47909
Poaceae	Zoysia macrostachya	5	Zma_g18349, Zma_g20989, Zma_g26985, Zma_g28042, Zma_g28454
Portulacaceae	Portulaca oleracea	5	evm.TU.LG10.13, evm.TU.LG14.1839, evm.TU.LG16.1539 ... evm.TU.LG17.10, evm.TU.LG26.124
Posidoniaceae	Posidonia oceanica	3	gene.Posoc01g27610, gene.Posoc02g10050, gene.Posoc02g33050
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_14_RagTag.800, evm.TU.Scaffold_1_RagTag.1061 ... evm.TU.Scaffold_2_RagTag.1287, evm.TU.Scaffold_5_RagTag.978
Rhizophoraceae	Carallia pectinifolia	6	nbisL1-mrna-11365, nbisL1-mrna-16380, nbisL1-mrna-21300 ... nbisL1-mrna-3932, nbisL1-mrna-3949, nbisL1-mrna-6543
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-13633, nbisL1-mrna-19903, nbisL1-mrna-3778 ... nbisL1-mrna-6703
Rhizophoraceae	Ceriops zippeliana	5	nbisL1-mrna-11595, nbisL1-mrna-17130, nbisL1-mrna-18731 ... nbisL1-mrna-18732, nbisL1-mrna-21146
Rhizophoraceae	Kandelia candel	4	add.evm.TU.utg000009l.158, evm.TU.utg000006l.299 ... evm.TU.utg000016l.874, evm.TU.utg000025l.29
Rhizophoraceae	Kandelia obovata	3	Maker00012252, Maker00013466, Maker00016966
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-11058, nbisL1-mrna-15879, nbisL1-mrna-17305 ... nbisL1-mrna-9990
Rhizophoraceae	Rhizophora mangle	5	nbisL1-mrna-13271, nbisL1-mrna-24761, nbisL1-mrna-5143 ... nbisL1-mrna-7600, nbisL1-mrna-8969
Salicaceae	Populus euphratica	6	populus_peu11542, populus_peu14516, populus_peu15034 ... populus_peu17037, populus_peu25221, populus_peu32695
Solanaceae	Lycium barbarum	4	gene-LOC132605273, gene-LOC132605599, gene-LOC132631240 ... gene-LOC132644086
Solanaceae	Solanum chilense	3	SOLCI004634600, SOLCI006272200, SOLCI006761300
Solanaceae	Solanum pennellii	4	gene-LOC107002575, gene-LOC107021605, gene-LOC107030178 ... gene-LOC107031661
Tamaricaceae	Reaumuria soongarica	3	STRG.1608_chr01_+, gene_3669, gene_4273
Tamaricaceae	Tamarix chinensis	3	TC06G1220, TC07G0930, TC11G2420
Zosteraceae	Zostera marina	4	Zosma01g29070.v3.1, Zosma03g30470.v3.1, Zosma04g20640.v3.1 ... Zosma05g24940.v3.1