Basic Information
Locus ID:
TC06G1133
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 37361144 | 37365810 | - | TC06G1133 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 69,738.49 Da | 43.69 | 88.23 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 19 | 123 | 2.26343E-47 | - |
| Pfam | PF03000 | NPH3 family | 214 | 478 | 1.9E-95 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 27 | 115 | 1.4E-7 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 18 | 115 | 1.18E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 13 | 134 | 3.3E-12 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 214 | 502 | 92.621979 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 98 | 11.026551 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 600 | 629 | - | - |
| Coils | Coil | Coil | 549 | 576 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_034698120.1 | BTB/POZ domain-containing protein At1g30440 [Vitis riparia] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | I7BX44 | BZIP6 OS=Tamarix hispida OX=189793 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology