Basic Information
Locus ID:
TC06G1115
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Small ubiquitin-related modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 36691991 | 36692302 | + | TC06G1115 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 11,633.18 Da | 56.16 | 73.79 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 29 | 96 | 4.7E-18 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 17 | 103 | 1.04E-21 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 8 | 103 | 2.3E-27 | - |
| SMART | SM00213 | ubq_7 | 28 | 99 | 0.0012 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 28 | 103 | 13.140663 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| Coils | Coil | Coil | 103 | 103 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55856.1 | Ubiquitin-like superfamily protein. | 0 |
| RefSeq | XP_047313788.1 | small ubiquitin-related modifier 2-like [Impatiens glandulifera] | 0 |
| Q7ZTK7 | Small ubiquitin-related modifier 2-A OS=Xenopus laevis OX=8355 GN=sumo2-a PE=3 SV=1 | 0 | |
| TrEMBL | C1BH81 | Small ubiquitin-related modifier OS=Oncorhynchus mykiss OX=8022 GN=SUMO3 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology