Basic Information
Locus ID:
TC06G0287
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Short Name:
CPK13
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 8518465 | 8531707 | + | TC06G0287 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 60,507.37 Da | 43.09 | 83.21 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 436 | 498 | 3.59159E-19 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 58 | 316 | 2.29444E-131 | - |
| Pfam | PF13499 | EF-hand domain pair | 363 | 423 | 3.2E-8 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 61 | 317 | 7.0E-74 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 435 | 498 | 1.6E-15 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 48 | 343 | 2.97E-85 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 346 | 524 | 5.62E-45 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 145 | 325 | 1.7E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 60 | 144 | 2.1E-24 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 326 | 501 | 2.9E-52 | - |
| SMART | SM00054 | efh_1 | 436 | 464 | 4.8E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 472 | 500 | 8.5E-7 | IPR002048 |
| SMART | SM00220 | serkin_6 | 59 | 317 | 6.3E-96 | IPR000719 |
| SMART | SM00054 | efh_1 | 364 | 392 | 0.0012 | IPR002048 |
| SMART | SM00054 | efh_1 | 400 | 428 | 5.3 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 468 | 503 | 15.266581 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 59 | 317 | 47.339725 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 360 | 395 | 14.346033 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 432 | 467 | 14.5413 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 65 | 88 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 373 | 385 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 179 | 191 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 445 | 457 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 481 | 493 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 36 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_010253754.1 | PREDICTED: calcium-dependent protein kinase 13 [Nelumbo nucifera] | 0 |
| Q8W4I7 | Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana OX=3702 GN=CPK13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J4ZIS3 | Calcium-dependent protein kinase 13 OS=Nyssa sinensis OX=561372 GN=F0562_017695 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology