Basic Information
Locus ID:
TC06G0272
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Short Name:
PDC3
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 7984208 | 7987362 | - | TC06G0272 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 65,465.01 Da | 31.88 | 89.16 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 408 | 589 | 1.47614E-84 | - |
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 49 | 210 | 1.03986E-90 | - |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 243 | 360 | 5.1E-20 | IPR012000 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 46 | 212 | 6.1E-34 | IPR012001 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 453 | 577 | 2.1E-13 | IPR011766 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 238 | 385 | 2.1E-32 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 46 | 219 | 5.31E-43 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 408 | 601 | 2.14E-39 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 402 | 588 | 2.2E-53 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 233 | 395 | 6.0E-42 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 42 | 219 | 7.3E-60 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 41 | 601 | 1.3E-207 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_010676788.2 | pyruvate decarboxylase 2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9M040 | Pyruvate decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=PDC4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9QMI0 | pyruvate decarboxylase OS=Spinacia oleracea OX=3562 GN=SOVF_162420 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology