Basic Information
Locus ID:
TC06G0043
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Short Name:
CIPK16
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 1308220 | 1309785 | - | TC06G0043 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.03 | 59,170.28 Da | 51.21 | 83.85 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 397 | 511 | 5.52352E-41 | - |
| Pfam | PF03822 | NAF domain | 393 | 450 | 4.7E-17 | IPR004041 |
| Pfam | PF00069 | Protein kinase domain | 84 | 344 | 6.3E-69 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 80 | 367 | 1.62E-87 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 74 | 378 | 1.2E-96 | - |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 390 | 516 | 2.5E-36 | - |
| SMART | SM00220 | serkin_6 | 84 | 344 | 1.1E-97 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 391 | 416 | 13.009231 | IPR018451 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 84 | 344 | 50.109989 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 202 | 214 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 90 | 113 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25110.1 | CBL-interacting protein kinase 25. member of AtCIPKs | 0 |
| RefSeq | XP_021659790.1 | CBL-interacting serine/threonine-protein kinase 25-like [Hevea brasiliensis] | 0 |
| Q8W1D5 | CBL-interacting serine/threonine-protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CIPK25 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2NFP9 | non-specific serine/threonine protein kinase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.33009_chr09_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC06G0043 |