Basic Information
Locus ID:
TC05G3057
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Inactive leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 110018807 | 110022154 | + | TC05G3057 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.36 | 93,301.85 Da | 52.25 | 99.49 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 243 | 260 | 0.57 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 69 | 4.6E-4 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 518 | 813 | 4.5E-22 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 41 | 358 | 3.23E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 494 | 822 | 2.11E-42 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 485 | 597 | 1.2E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 599 | 838 | 6.3E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 258 | 9.8E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 259 | 361 | 2.6E-16 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 241 | 264 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 312 | 332 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 146 | 169 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 170 | 195 | 8.5 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 513 | 817 | 26.22353 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 826 | 843 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 826 | 857 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03770.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_045797402.1 | probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Trifolium pratense] | 0 |
| Q8LFN2 | Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 OS=Arabidopsis thaliana OX=3702 GN=At3g03770 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I4E0I4 | probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 isoform X1 OS=Juglans regia OX=51240 GN=LOC108985165 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg15215 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_11456, gene_15306 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah002802, Ah006606 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_5g099400 |
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg202, Sbi_jg27947, Sbi_jg32624, Sbi_jg36339 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg4411, Seu_jg7511 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00027488, GOSA_00029022 |
| Amaranthaceae | Suaeda glauca | 6 | Sgl25324, Sgl25330, Sgl30501, Sgl30502, Sgl53564, Sgl58828 |
| Amaranthaceae | Chenopodium album | 5 | gene:ENSEOMG00000007631, gene:ENSEOMG00000020507 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.4AG0013380, CQ.Regalona.r1.5AG0012160 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30093140, pistato.v30168970 |
| Apiaceae | Apium graveolens | 3 | Ag10G02139, Ag3G00727, Ag4G01421 |
| Arecaceae | Cocos nucifera | 1 | scaffold029945G000030 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103697058, gene-LOC120103816 |
| Asteraceae | Flaveria trinervia | 2 | Ftri16G07591, Ftri16G24030 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G03770.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10020088m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g02740.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g059690.2N, BniB07g033990.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq08G1435, Ceq08G1594 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl08G1466, Cgl08G1629 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno06g13840 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate02g29020, gene.Thate02g40110 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.2007 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00014732, Pov_00039450 |
| Plumbaginaceae | Limonium bicolor | 5 | Lb1G05687, Lb1G05702, Lb3G16811, Lb4G23243, Lb6G31534 |
| Poaceae | Echinochloa crus-galli | 6 | AH01.169, AH03.326, BH03.3920, BH03.405, CH01.431, CH03.475 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_3AG0213030, gene-QOZ80_3BG0258190 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0151770.1, HORVU.MOREX.r3.5HG0517490.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_042644, gene-QYE76_061430 |
| Poaceae | Oryza coarctata | 4 | Oco05G025730, Oco06G026600, Oco13G002090, Oco14G002190 |
| Poaceae | Oryza sativa | 2 | LOC_Os03g57780.1, LOC_Os07g07230.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_01G054200, gene-BS78_02G044300 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0105334, Pt_Chr0303608 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr01G003080, Chr0G004870, Chr12G034950, Chr19G017530 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G451200, Tel5E01G671600 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC2AG034220, gene_TRIDC2BG038760 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS2A02G243400.4, TraesCS2B02G270100.2 ... |
| Poaceae | Zea mays | 2 | Zm00001eb060390_P002, Zm00001eb300880_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-15320, nbis-gene-26906 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g311, Zma_g6034 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG06.1377, evm.TU.LG11.760, evm.TU.LG18.473 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g01110 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_1_RagTag.1090, evm.TU.Scaffold_2_RagTag.1805 |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-2999, nbisL1-mrna-3169, nbisL1-mrna-6521 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-12491, nbisL1-mrna-362 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-13902, nbisL1-mrna-21120 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000009l.215, evm.TU.utg000016l.857 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00005341, Maker00016894 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-11042, nbisL1-mrna-12821 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-13298, nbisL1-mrna-16380 |
| Salicaceae | Populus euphratica | 3 | populus_peu06037, populus_peu16123, populus_peu19349 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132607281, gene-LOC132645325 |
| Solanaceae | Solanum chilense | 3 | SOLCI002478900, SOLCI003140300, SOLCI004726300 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107002815, gene-LOC107005571, gene-LOC107008606 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.24461_chr08_-, gene_12220 |
| Tamaricaceae | Tamarix chinensis | 2 | TC05G2416, TC05G3057 |
| Zosteraceae | Zostera marina | 2 | Zosma05g32970.v3.1, Zosma06g29810.v3.1 |