Basic Information
Locus ID:
TC05G2353
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 91998089 | 92004026 | + | TC05G2353 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 62,236.75 Da | 35.10 | 109.80 | 0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 33 | 449 | 4.0E-56 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 156 | 208 | 1.6E-15 | - |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 164 | 174 | 1.5E-13 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 103 | 117 | 1.5E-13 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 89 | 100 | 1.5E-13 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 118 | 126 | 1.5E-13 | IPR004709 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 541 | 562 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27150.1 | Na+/H+ exchanger 1. Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development. | 0 |
| RefSeq | XP_050274492.1 | sodium/hydrogen exchanger 1-like isoform X1 [Quercus robur] | 0 |
| Q68KI4 | Sodium/hydrogen exchanger 1 OS=Arabidopsis thaliana OX=3702 GN=NHX1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2L2FHJ2 | Sodium/hydrogen exchanger OS=Fagopyrum esculentum OX=3617 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology