Basic Information
Locus ID:
TC05G2260
Species & Taxonomic ID:
Tamarix chinensis & 189791
Genome Assembly:
GCA_030549775.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 89670851 | 89674384 | - | TC05G2260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 112,404.39 Da | 34.06 | 100.34 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 719 | 989 | 1.5E-46 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 285 | 335 | 9.0E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 444 | 464 | 0.64 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 80 | 4.2E-11 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 514 | 529 | 0.7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 715 | 992 | 3.83E-69 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 67 | 317 | 1.87E-53 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 243 | 589 | 9.42E-74 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 800 | 1005 | 2.3E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 389 | 4.2E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 189 | 288 | 2.1E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 390 | 632 | 7.5E-64 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 188 | 6.6E-39 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 717 | 799 | 3.3E-19 | - |
| SMART | SM00369 | LRR_typ_2 | 346 | 370 | 98.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 130 | 153 | 93.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 442 | 465 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 106 | 129 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 202 | 226 | 48.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 298 | 322 | 94.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 717 | 992 | 3.2E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 250 | 274 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 562 | 585 | 40.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 717 | 999 | 37.558998 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 842 | 854 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 301 | 314 | 2.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 562 | 575 | 2.3E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08590.1 | Leucine-rich receptor-like protein kinase family protein. similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888) | 0 |
| RefSeq | XP_021772712.1 | MDIS1-interacting receptor like kinase 1-like [Chenopodium quinoa] | 0 |
| Q9FRS6 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana OX=3702 GN=PXL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J5BB31 | Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_025659 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology